All modules for which code is available
- cobra
- cobra.core
- cobra.core.configuration
- cobra.core.dictlist
- cobra.core.formula
- cobra.core.gene
- cobra.core.group
- cobra.core.metabolite
- cobra.core.model
- cobra.core.object
- cobra.core.reaction
- cobra.core.singleton
- cobra.core.solution
- cobra.core.species
- cobra.exceptions
- cobra.flux_analysis.deletion
- cobra.flux_analysis.fastcc
- cobra.flux_analysis.gapfilling
- cobra.flux_analysis.geometric
- cobra.flux_analysis.helpers
- cobra.flux_analysis.loopless
- cobra.flux_analysis.moma
- cobra.flux_analysis.parsimonious
- cobra.flux_analysis.phenotype_phase_plane
- cobra.flux_analysis.reaction
- cobra.flux_analysis.room
- cobra.flux_analysis.variability
- cobra.io
- cobra.manipulation.annotate
- cobra.manipulation.delete
- cobra.manipulation.modify
- cobra.manipulation.validate
- cobra.medium.annotations
- cobra.medium.boundary_types
- cobra.medium.minimal_medium
- cobra.sampling
- cobra.summary
- cobra.summary.metabolite_summary
- cobra.summary.model_summary
- cobra.summary.reaction_summary
- cobra.summary.summary
- cobra.test
- cobra.test.conftest
- cobra.test.data.update_pickles
- cobra.test.test_core.conftest
- cobra.test.test_core.test_configuration
- cobra.test.test_core.test_core_reaction
- cobra.test.test_core.test_dictlist
- cobra.test.test_core.test_gene
- cobra.test.test_core.test_group
- cobra.test.test_core.test_metabolite
- cobra.test.test_core.test_model
- cobra.test.test_core.test_solution
- cobra.test.test_flux_analysis.conftest
- cobra.test.test_flux_analysis.test_deletion
- cobra.test.test_flux_analysis.test_fastcc
- cobra.test.test_flux_analysis.test_gapfilling
- cobra.test.test_flux_analysis.test_geometric
- cobra.test.test_flux_analysis.test_loopless
- cobra.test.test_flux_analysis.test_moma
- cobra.test.test_flux_analysis.test_parsimonious
- cobra.test.test_flux_analysis.test_phenotype_phase_plane
- cobra.test.test_flux_analysis.test_reaction
- cobra.test.test_flux_analysis.test_room
- cobra.test.test_flux_analysis.test_variability
- cobra.test.test_io.conftest
- cobra.test.test_io.test_annotation
- cobra.test.test_io.test_annotation_format
- cobra.test.test_io.test_io_order
- cobra.test.test_io.test_json
- cobra.test.test_io.test_mat
- cobra.test.test_io.test_notes
- cobra.test.test_io.test_pickle
- cobra.test.test_io.test_sbml
- cobra.test.test_io.test_yaml
- cobra.test.test_manipulation
- cobra.test.test_medium
- cobra.test.test_sampling.conftest
- cobra.test.test_sampling.test_achr
- cobra.test.test_sampling.test_optgp
- cobra.test.test_sampling.test_sampling
- cobra.test.test_util.test_array
- cobra.test.test_util.test_context
- cobra.test.test_util.test_solver
- cobra.test.test_util.test_util
- cobra.util
- test_metabolite_summary
- test_model_summary
- test_reaction_summary