17.1.1.8.1.3.1.1. cobra.test.test_flux_analysis.conftest

Define module level fixtures.

17.1.1.8.1.3.1.1.1. Module Contents

17.1.1.8.1.3.1.1.1.1. Functions

all_solvers(request)	Return the avaialble solvers.
qp_solvers(request)	Return the available QP solvers.
room_model()	Generate ROOM model as described in [1]_
room_solution()	Generate ROOM solution as described in [1]_

cobra.test.test_flux_analysis.conftest.all_solvers(request)

Return the avaialble solvers.

cobra.test.test_flux_analysis.conftest.qp_solvers(request)

Return the available QP solvers.

cobra.test.test_flux_analysis.conftest.room_model()

Generate ROOM model as described in [1]_

References

1

Tomer Shlomi, Omer Berkman and Eytan Ruppin, “Regulatory on/off minimization of metabolic flux changes after genetic perturbations”, PNAS 2005 102 (21) 7695-7700; doi:10.1073/pnas.0406346102

cobra.test.test_flux_analysis.conftest.room_solution()

Generate ROOM solution as described in [1]_

References

1

Tomer Shlomi, Omer Berkman and Eytan Ruppin, “Regulatory on/off minimization of metabolic flux changes after genetic perturbations”, PNAS 2005 102 (21) 7695-7700; doi:10.1073/pnas.0406346102