17.1.1.5.1.1. cobra.medium.annotations

Lists and annotations for compartment names and reactions.

Please send a PR if you want to add something here :)

17.1.1.5.1.1.1. Module Contents

cobra.medium.annotations.excludes[source]

A list of sub-strings in reaction IDs that usually indicate that the reaction is not a reaction of the specified type.

cobra.medium.annotations.sbo_terms[source]

SBO term identifiers for various boundary types.

cobra.medium.annotations.compartment_shortlist[source]

A list of common compartment abbreviations and alternative names.