17.20. test_geometric

Test functionalities of Geometric FBA.

17.20.1. Module Contents

17.20.1.1. Functions

geometric_fba_model()

Generate geometric FBA model as described in 1

test_geometric_fba_benchmark(model, benchmark, all_solvers)

Benchmark geometric_fba.

test_geometric_fba(geometric_fba_model, all_solvers)

Test geometric_fba.

test_geometric.geometric_fba_model()[source]

Generate geometric FBA model as described in 1

References

1(1,2)

Smallbone, Kieran & Simeonidis, Vangelis. (2009). Flux balance analysis: A geometric perspective. Journal of theoretical biology.258. 311-5. 10.1016/j.jtbi.2009.01.027.

test_geometric.test_geometric_fba_benchmark(model, benchmark, all_solvers)[source]

Benchmark geometric_fba.

test_geometric.test_geometric_fba(geometric_fba_model, all_solvers)[source]

Test geometric_fba.