All modules for which code is available
- cobra
- cobra.core
- cobra.core.configuration
- cobra.core.dictlist
- cobra.core.formula
- cobra.core.gene
- cobra.core.group
- cobra.core.metabolite
- cobra.core.model
- cobra.core.object
- cobra.core.reaction
- cobra.core.singleton
- cobra.core.solution
- cobra.core.species
- cobra.exceptions
- cobra.flux_analysis.deletion
- cobra.flux_analysis.fastcc
- cobra.flux_analysis.gapfilling
- cobra.flux_analysis.geometric
- cobra.flux_analysis.helpers
- cobra.flux_analysis.loopless
- cobra.flux_analysis.moma
- cobra.flux_analysis.parsimonious
- cobra.flux_analysis.phenotype_phase_plane
- cobra.flux_analysis.reaction
- cobra.flux_analysis.room
- cobra.flux_analysis.variability
- cobra.io
- cobra.io.dict
- cobra.io.json
- cobra.io.mat
- cobra.io.sbml
- cobra.io.web
- cobra.io.web.abstract_model_repository
- cobra.io.web.bigg_models_repository
- cobra.io.web.biomodels_repository
- cobra.io.web.load
- cobra.io.yaml
- cobra.manipulation.annotate
- cobra.manipulation.delete
- cobra.manipulation.modify
- cobra.manipulation.validate
- cobra.medium.annotations
- cobra.medium.boundary_types
- cobra.medium.minimal_medium
- cobra.sampling
- cobra.summary
- cobra.summary.metabolite_summary
- cobra.summary.model_summary
- cobra.summary.reaction_summary
- cobra.summary.summary
- cobra.test
- cobra.util
- conftest
- test_achr
- test_annotation
- test_annotation_format
- test_array
- test_configuration
- test_context
- test_core_reaction
- test_deletion
- test_dictlist
- test_fastcc
- test_gapfilling
- test_gene
- test_geometric
- test_group
- test_io_order
- test_json
- test_load
- test_loopless
- test_mat
- test_metabolite
- test_metabolite_summary
- test_model
- test_model_summary
- test_moma
- test_notes
- test_optgp
- test_parsimonious
- test_phenotype_phase_plane
- test_pickle
- test_reaction
- test_reaction_summary
- test_room
- test_sampling
- test_sbml
- test_solution
- test_solver
- test_util
- test_variability
- test_yaml
- update_pickles