17.1.1.1.1.1.1.1. cobra.core.summary.metabolite_summary

Define the MetaboliteSummary class.

17.1.1.1.1.1.1.1.1. Module Contents

17.1.1.1.1.1.1.1.1.1. Classes

MetaboliteSummary

Define the metabolite summary.
class cobra.core.summary.metabolite_summary.MetaboliteSummary(metabolite, model, **kwargs)[source]

Bases: cobra.core.summary.Summary

Define the metabolite summary.

metabolite

The metabolite to summarize.

Type

cobra.Metabolite

See also

Summary

Parent that defines further attributes.

ReactionSummary, ModelSummary

_generate(self)[source]
Returns

flux_summary – The DataFrame of flux summary data.

Return type

pandas.DataFrame

to_frame(self)[source]
Returns

Return type

A pandas.DataFrame of the summary.

_to_table(self)[source]
Returns

Return type

A string of the summary table.