17.7. test_variability
¶
Test functionalities of Flux Variability Analysis.
17.7.1. Module Contents¶
17.7.1.1. Functions¶
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Benchmark FVA. |
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Test FVA using pFBA. |
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Test FVA. |
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Test parallel FVA. |
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Benchmark loopless FVA. |
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Test loopless FVA. |
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Test DataFrame obtained from FVA. |
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Test FVA infeasibility. |
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Test minimization using FVA. |
Test find_blocked_reactions() [no specific solver]. |
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Test find_essential_genes(). |
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Test find_blocked_reactions(). |
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Test find_blocked_reactions(). |
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test_variability.
test_flux_variability_benchmark
(large_model, benchmark, all_solvers)[source]¶ Benchmark FVA.
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test_variability.
test_pfba_flux_variability
(model, pfba_fva_results, fva_results, all_solvers)[source]¶ Test FVA using pFBA.
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test_variability.
test_parallel_flux_variability
(model, fva_results, all_solvers)[source]¶ Test parallel FVA.
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test_variability.
test_flux_variability_loopless_benchmark
(model, benchmark, all_solvers)[source]¶ Benchmark loopless FVA.