Documentation for COBRApy¶
For installation instructions, please see INSTALL.rst.
Many of the examples below are viewable as IPython notebooks, which can be viewed at nbviewer.
- 1. Getting Started
- 2. Building a Model
- 3. Reading and Writing Models
- 4. Simulating with FBA
- 5. Simulating Deletions
- 6. Production envelopes
- 7. Flux sampling
- 8. Loopless FBA
- 9. Gapfillling
- 10. Growth media
- 11. Solvers
- 12. Tailored constraints, variables and objectives
- 13. Using the COBRA toolbox with cobrapy
- 14. FAQ
- 15. Sphinx AutoAPI Index